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Vol. 1

International Journal of Computational Biology and Drug Design

2018 Vol. 11 No. 1/2

Special Issue on: Recent Advances in Computational Systems Biology and Bioinformatics

Guest Editors: Dr. Jianhua Ruan, Dr. Wenjin Zheng, Dr. Zhandong Liu and Dr. Zhongming Zhao

 

Introduction
PagesTitle and authors
5-22Evaluation of biological and technical variations in low-input RNA-Seq and single-cell RNA-Seq
Fan Gao; Jae Mun Kim; JiHong Kim; Ming-Yi Lin; Charles Y. Liu; Jonathan J. Russin; Christopher P. Walker; Reymundo Dominguez; Adrian Camarena; Joseph D. Nguyen; Jennifer Herstein; William Mack; Oleg V. Evgrafov; Robert H. Chow; James A. Knowles; Kai Wang
DOI: 10.1504/IJCBDD.2018.090839

23-38Heterogeneity in untreated, stressed and drug-tolerant cells: insights into the evolution of cancer resistance
Bhagya K. Wijayawardena; Gopinath Sivasankaran; Lang Li
DOI: 10.1504/IJCBDD.2018.090846

39-51A flexible approach to reconstruct the genomic spatial structure by the genetic algorithm
Yan Zhang; William Hoskins; Ruofan Xia; Xiya Xia; Jim W. Zheng; Jijun Tang
DOI: 10.1504/IJCBDD.2018.090825

52-66A GPU-CPU heterogeneous algorithm for NGS read alignment
Ahmad Al Kawam; Sunil Khatri; Aniruddha Datta
DOI: 10.1504/IJCBDD.2018.090840

67-89Signal translational efficiency between mRNA expression and antibody-based protein expression for breast cancer and its subtypes from cell lines to tissue
Aida Yazdanparast; Lang Li; Milan Radovich; Lijun Cheng
DOI: 10.1504/IJCBDD.2018.090833

90-113Native state of complement protein C3d analysed via hydrogen exchange and conformational sampling
Didier Devaurs; Malvina Papanastasiou; Dinler A. Antunes; Jayvee R. Abella; Mark Moll; Daniel Ricklin; John D. Lambris; Lydia E. Kavraki
DOI: 10.1504/IJCBDD.2018.090834

114-134Inhibition of polyamine biosynthesis for toxicity control in Serratia marcescens strain WW4 by targeting ornithine decarboxylase: a structure-based virtual screening study
Kalyani Dhusia; Pramod K. Yadav; Rohit Farmer; Pramod W. Ramteke
DOI: 10.1504/IJCBDD.2018.090837

135-153Identifying the dynamic gene regulatory network during latent HIV-1 reactivation using high-dimensional ordinary differential equations
Jaejoon Song; Michelle Carey; Hongjian Zhu; Hongyu Miao; Juan Camilo Ramírez; Hulin Wu
DOI: 10.1504/IJCBDD.2018.090844

154-170Risk-associated and pathway-based method to detect association with Alzheimer's disease
Jeffrey Mitchel; Laszlo Prokai; Youping Deng; Fan Zhang; Robert Barber
DOI: 10.1504/IJCBDD.2018.090838

171-182Neural signature of event-related N200 and P300 modulation in parietal lobe during human response inhibition
Rupesh Kumar Chikara; Oleksii Komarov; Li-Wei Ko
DOI: 10.1504/IJCBDD.2018.090842