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International Journal of Bioinformatics Research and Applications

International Journal of Bioinformatics Research and Applications (IJBRA)

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International Journal of Bioinformatics Research and Applications (27 papers in press)

Regular Issues

  • IRNN-SS: Deep Learning for Optimized Protein Secondary Structure Prediction through PROMOTIF and DSSP Annotation Fusion   Order a copy of this article
    by Mukhtar Sofi, M. Arif Wani 
    Abstract: DSSP stands as a foundational tool in the domain of protein secondary structure prediction, yet it encounters notable challenges in accurately annotating irregular structures, such as -turns and -turns, which constitute approximately 25-30% and 10-15% of protein turns, respectively. This limitation arises from DSSP's reliance on hydrogen-bond analysis, resulting in annotation gaps and reduced consensus on irregular structures. Alternatively, PROMOTIF excels at identifying these irregular structure annotations using phi-psi information. Despite their complementary strengths, previous methodologies utilised DSSP and PROMOTIF separately, leading to disparate prediction methods for protein secondary structures, hampering comprehensive structure analysis crucial for drug development. In this work, we bridge this gap using an annotation fusion approach, combining DSSP structures with beta, and gamma turns. We introduce IRNN-SS, a model employing deep inception and bidirectional gated recurrent neural networks, achieving 77.4% prediction accuracy on benchmark datasets, outpacing current models.
    Keywords: protein secondary structure; PSS; beta-turns; gamma-turns; prediction; deep learning.
    DOI: 10.1504/IJBRA.2025.10064216
     
  • Feature Analytics of Asthma Severity Levels for Bioinformatics Improvement Using Gini Importance   Order a copy of this article
    by Temitope Elizabeth Ogunbiyi, Micheal A. Adegoke, Oluwatobi A. Abe, Joseph A. Ojo 
    Abstract: In the context of asthma severity prediction, this study delves into the feature importance of various symptoms and demographic attributes. Leveraging a comprehensive dataset encompassing symptom occurrences across varying severity levels, this investigation employs visualisation techniques, such as stacked bar plots, to illustrate the distribution of symptomatology within different severity categories. Additionally, correlation coefficient analysis is applied to quantify the relationships between individual attributes and severity levels. Moreover, the study harnesses the power of Random Forest and the Gini importance methodology, essential tools in feature importance analytics, to discern the most influential predictors in asthma severity prediction. The experimental results bring to light compelling associations between certain symptoms, notably runny-nose and nasal-congestion, and specific severity levels, elucidating their potential significance as pivotal predictive indicators. Conversely, demographic factors, encompassing age groups and gender, exhibit comparatively weaker correlations with symptomatology. These findings underscore the pivotal role of individual symptoms in characterising asthma severity, reinforcing the potential for feature importance analysis to enhance predictive models in the realm of asthma management and bioinformatics.
    Keywords: bioinformatics; asthma; severity prediction; feature importance; machine learning.
    DOI: 10.1504/IJBRA.2025.10064255
     
  • Alzheimer's Disease Classification using Hybrid Alex-ResNet-50 Model   Order a copy of this article
    by E. Semmalar, R. Shoba Rani 
    Abstract: Alzheimer’s disease (AD), a leading cause of dementia and mortality, presents a growing concern due to its irreversible progression and the rising costs of care. Early detection is crucial for managing AD, which begins with memory deterioration caused by the damage to neurons involved in cognitive functions. Although incurable, treatments can manage its symptoms. This study introduces a hybrid AlexNet+ResNet-50 model for AD diagnosis, utilising a pre-trained convolutional neural network (CNN) through transfer learning to analyse MRI scans. This method classifies MRI images into Alzheimer's disease (AD), moderate cognitive impairment (MCI), and normal control (NC), enhancing model efficiency without starting from scratch. Incorporating transfer learning allows for refining the CNN to categorise these conditions accurately. Our previous work also explored atlas-based segmentation combined with a U-Net model for segmentation, further supporting our findings. The hybrid model demonstrates superior performance, achieving 94.21% accuracy in identifying AD cases, indicating its potential as a highly effective tool for early AD diagnosis and contributing to efforts in managing the disease's impact.
    Keywords: Alzheimer’s disease; AD; segmentation; classification; CNN; AlexNet; U-Net; ResNet-50; moderate cognitive impairment.
    DOI: 10.1504/IJBRA.2025.10064352
     
  • Optimisation with Deep Learning for Leukaemia Classification in Federated Learning   Order a copy of this article
    by Smritilekha Das, PADMANABAN K 
    Abstract: The most common kind of blood cancer in people of all ages is leukaemia. The fractional mayfly optimisation (FMO) based DenseNet is proposed for the identification and classification of leukaemia in federated learning (FL). Initially, the input image is pre-processed by adaptive median filter (AMF). Then, cell segmentation is done using the Scribble2label. Afterthat, image augmentation is accomplished. Finally, leukaemia classification is accomplished utilising DenseNet, which is trained using the FMO. Here, the FMO is devised by merging the mayfly algorithm (MA) and the fractional concept (FC). Following local training, the server performs local updating and aggregation using a weighted average by RV coefficient. The results showed that FMO-DenseNet attained maximum accuracy, true negative rate (TNR) and true positive rate (TPR) of 94.3%, 96.5% and 95.3%. Moreover, FMO-DenseNet gained minimum mean squared error (MSE) and root mean squared error (RMSE) of 5.7%, 9.2% and 30.4%.
    Keywords: leukaemia; federated learning; fractional concept; mayfly algorithm; DenseNet.
    DOI: 10.1504/IJBRA.2024.10064487
     
  • Deep Learning Approach using Modified DarkNet-53 for Renal Cell Carcinoma Grading   Order a copy of this article
    by G. Sathish Kumar, G. Uma Maheshwari, C. Selvan, M. Nagasuresh, Rasi D, Swathypriyadharsini Palaniswamy, Sathish Kumar Danasegaran 
    Abstract: An accurate and effective diagnostic procedures are required for appropriate treatment planning for renal cell carcinoma, the most frequent form of kidney cancer. Using fusion module a network dubbed Modified Darknet (MDNet) was developed for image-based small-target detection. We built MDNet on top of a modified version of Darknet53, which itself a scale matching approach, to increase its speed and accuracy. By combining the results of several convolutional neural network (CNN) models, the ensemble structure improves classification accuracy. The effectiveness of a classification algorithm using kidney histopathology pictures dataset is measured in accuracy, precision, recall, sensitivity, specificity and f1-score. The results show that the ensemble deep learning method outperforms both standalone CNN models and more conventional machine learning techniques in RCC classification. Overall grade classification accuracy of 98.9%, a sensitivity of 98.2%, and a high classification specificity of 98.7%, in distinguishing tissues.
    Keywords: Modified Darknet; Convolutional Neural Network; Ensemble Deep Learning; Kidney Cancer; Renal Cell Carcinoma; Whole Slide Images.
    DOI: 10.1504/IJBRA.2025.10064488
     
  • Automatic Pectoral Muscles and Artifacts Removal in Mammogram Images for Improved Breast Cancer Diagnosis   Order a copy of this article
    by Saguna Ingle, Amarsinh Vidhate, Sangita Chaudhari 
    Abstract: Breast cancer is leading cause of mortality among women compared to other types of cancers. Hence, early breast cancer diagnosis is crucial to the success of treatment. Various pathological and imaging tests are available for the diagnosis of breast cancer. However, it may introduce errors during detection and interpretation, leading to false-negative and false-positive results due to lack of pre-processing of it. To overcome this issue, we proposed a effective image pre-processing technique-based on Otsu's thresholding and Single-Seeded Region Growing (SSRG) to remove artifacts and segment the pectoral muscle from breast mammograms. To validate the proposed method, a publicly available MIAS dataset has utilised. The experimental finding showed that proposed technique improved 18% breast cancer detection accuracy compared to existing methods. The proposed methodology works efficiently for artifact removal and pectoral segmentation at different shapes and nonlinear patterns.
    Keywords: breast cancer; artifacts; pectoral muscle; image processing; mammogram; image enhancement.
    DOI: 10.1504/IJBRA.2024.10064495
     
  • HDAC Inhibitors and their Potential towards Cancer Treatment   Order a copy of this article
    by Sanjay Kumar Choubey, Sachin Kumar, Medha Kumari 
    Abstract: Histone deacetylases (HDACs) play a key role in chromatin structure modulation through deacetylation of histones leading to formation of highly compact DNA-histone complex. HDACs have been reported to be implicated in multiple types of cancers. Blocking the activities of histone deacetylases will help to overcome gene repression pressure and it would be possible to check the incessant growth of cells in tumour. Therefore the interest has been developed to design the HDAC inhibitors and their analogues and histone deacetylases are now considered as potential targets for their wide distribution in various forms of cancer. HDAC inhibitors display their role by regulating cyclin dependent kinases (cdK), inducing p21 and various preapoptotic genes like Bax, Bak, repressing the activities of growth factors like VEGF, repressing transcription factor HIF-1 facilitating arrest of cell cycle, modulating various signalling pathways like STAT signalling, AMPK signalling, inducing cell adhesion molecule E-cadherin.
    Keywords: cyclin dependent kinase; histone deacetylase; carcinogenesis; HDAC inhibitor.
    DOI: 10.1504/IJBRA.2025.10065088
     
  • Computational Analysis of Alkoxy-Azoxybenzene Liquid Crystals: A Comparative Investigation with Experimental Data for Bioinformatics Applications   Order a copy of this article
    by Sushma M, Mahadev J, Manju V. V, Nandaprakash M. B, Somashekar R 
    Abstract: Through computational modelling, we have gained valuable insights into the homologous series of liquid crystalline materials. Our study involved comparing the computational results with reported experimental values for several members of the series. We focused on various parameters, including lattice energy, orientational order parameter, moduli, stress-strain behaviour, Helmholtz free energy, orientational distribution function, zero-point energy, and molecular polarisabilities. The primary motivation behind this study was to unravel the intricate inter- and intra-molecular interactions that govern the range and nature of mesophases observed in these compounds. We are excited to report that our results align with this objective, highlighting the significance of our findings in this direction. Knowledge of these compounds finds applications in sensitive nucleic acid detection, label-free protein analysis, and the development of biocompatible sensors for real-time cellular monitoring.
    Keywords: liquid crystal; odd-even effect; elastic moduli.
    DOI: 10.1504/IJBRA.2025.10065091
     
  • A Novel Linear Discriminant Analysis Based Classification of R-peaks in Different ECG Signal Datasets   Order a copy of this article
    by Varun Gupta 
    Abstract: In the current scenario, there is a need to develop efficient pre-processing and classification techniques which can form the basis of an automated health monitoring system. In this paper, independent component analysis (ICA) is proposed to be used for electrocardiogram (ECG) signal processing as reported by the same authors, who found it to yield better results that time for limited datasets. Here, it has been applied on a variety of datasets, viz., real and standard and the obtained results are compared with those obtained using another widely used and reported technique, viz., adaptive notch filter (ANF) in the literature. For classification, linear discriminant analysis (LDA) is proposed to be used as it performs multi-class classification tasks better. The obtained results demonstrate the utility of the proposed methodology for bioinformatics community, especially during critical heart surgeries and designing of evolving healthcare systems in future.
    Keywords: electrocardiogram; ECG; adaptive notch filter; ANF; independent component analysis; ICA; linear discriminant analysis; LDA; signal-to-noise ratio; SNR.
    DOI: 10.1504/IJBRA.2025.10065193
     
  • A Novel Approach for Early Detection and Grading of Diabetic Retinopathy by using Ensemble Model   Order a copy of this article
    by Riddhi Parasnaik, Anvita Agarkar, Raashi Jatakia, Gajanan Nagare 
    Abstract: This study investigates the factors driving HR professionals' intention to adopt AI in talent acquisition in the Indian IT industry by adopting a mixed technology-organization-environment (TOE) and task-technology fit (TTF) model. We administered a survey instrument on 459 HR professionals including talent acquisition executives randomly selected from various IT firms located in major Indian cities. The PLS-SEM results revealed that the perception of cost effectiveness, relative advantage, HR readiness, top management support and competitive pressure significantly influence the adoption intention of HR professionals of the Indian IT companies. The findings of the study would help understand the factors that influence HR managers' decisions to adopt AI in talent acquisition process. Further, the study contributes to the existing adoption theories by integrating TOE and TTF models to HR contexts and offers actionable insights for practicing managers of the organisations aiming to adopt AI in the recruitment process.
    Keywords: digital transformation; artificial intelligence; AI; talent acquisition; technology-organisation-environment model; task technology fit model; India.
    DOI: 10.1504/IJBRA.2025.10065195
     
  • Characterising the Cardioprotective Potential of Sida Rhombifolia, Polygonum Chinense and Phyla Nodiflora Aqueous Extracts: Investigating its Effect on Foam Cell Formation   Order a copy of this article
    by Xiao Wei Lee, Wei Sheng Siew, Siau Hui Mah, Wei Hsum Yap 
    Abstract: Cardiovascular diseases represent one of the leading causes of mortality. Studies have shown that medicinal plants with anti-inflammatory and antioxidant activities are potential cardioprotective agents. This study aimed to determine cardioprotective potential of Sida rhombifolia, Polygonum chinense and Phyla nodiflora in inhibiting macrophage foam cells formation and its regulatory mechanisms. The findings showed that S. rhombifolia and P. nodiflora have minimal cytotoxicity effect on THP-1 macrophages, however P. chinense exhibited cytotoxic effect with an IC50 of 11.83
    Keywords: atherosclerosis; foam cell; network pharmacology.
    DOI: 10.1504/IJBRA.2025.10065324
     
  • A Comparative Study on the Classification of SARS-CoV-2 Variants from Biosequence Images using Pre-Trained Deep Learning Models   Order a copy of this article
    by Shahina K, Biji C. L, Achuthsankar S. Nair 
    Abstract: Coronavirus disease has raised serious health concern across the globe. Identification of severe acute respiratory syndrome corona virus 2 (SARS-CoV-2) variants are indeed a concern in controlling its spread. SARS-CoV-2 variants are classified based on the variation in its genomic sequences. Alpha, beta, delta, gamma and omicron were reported as the most deleterious variants. Genome sequence can be represented uniquely using chaos game representation (CGR) images. A large-scale genome sequence dataset, belonging to the five categories of these variant were retrieved from GISAID. An attempt was made to compile benchmark CGR images of 25,000 SARS-CoV-2 variants genomic sequences. The present study aims to compare the performance of different pre-trained deep learning models in classifying SARS-CoV-2 variants from its CGR images. VGG16, VGG19, ResNet50, InceptionV3, Xception, InceptionResNetV2 and MobileNetV2 were the models used for the study. SARS-CoV-2 variant detection was found effective with VGG19 with an accuracy of 94%. Data augmentation techniques were also applied on the CGR images of biosequences and it was found that data augmentation methods decreased the accuracy of different transfer learning models.
    Keywords: genome sequence; deep learning; SARS-CoV-2 variants; chaos game representation; transfer learning; classification; COVID-19.
    DOI: 10.1504/IJBRA.2025.10065325
     
  • Skin Cancer Classification using Ensemble Classification Model with Improved Deep Joint Segmentation   Order a copy of this article
    by Jinu P. Sainudeen, Sathyalakshmi S 
    Abstract: We present a six-phase skin cancer classification model based on Improved Deep Joint Segmentation (IDJS) in this work. The pre-processed image is segmented using IDJS in the second phase, after contrast enhancement with assistance from Contrast Limited Adaptive Histogram Equalization (CLAHE) in the first phase. The features of GLCM, CCF, LGIP, and Median Ternary Pattern (MTP) are retrieved in the third phase. Data augmentation for the extracted features is carried out in the fourth phase. The fifth phase is ensemble classification using the Deep Maxout, LSTM, and CNN based on the enhanced data. To determine the final classified label, the enhanced score level fusion receives the output scores from these classifiers. While the RF is 0.9171, Deep Maxout is 0.9382, LSTM is 0.9362, Bi-GRU is 0.8150, RNN is 0.8687, CNN is 0.9382, TL-GOOGLENET is 0.9134, and KNN is 0.9328, respectively, the accuracy of the Ensemble approach is 0.9689.
    Keywords: DL; Skin cancer; segmentation; Classification; Recommendation.
    DOI: 10.1504/IJBRA.2025.10065333
     
  • Shri-Anna (Millets), Super Food for Present Epoch: A Thoughtful Study in Diverse Dimensions   Order a copy of this article
    by Bhavna Singh, Rohit Rastogi, Bhupinder Singh, Harpreet Kaur, Richa Singh, Ratik Dubey, Jagriti K, Tanya Tyagi 
    Abstract: The 21st century, the era of science, the era of development, when humankind is excelling in all fronts, is also the time when we have to face the gravest problems of all time. Global warming, climate change, overpopulation, chronic hunger, pandemics, wars are to name a few of them. We are fortunate to have the treasure of knowledge ensnared in the ancient Indian Vedic texts and scriptures, which have the potential solution for all the grave problems encircling the world in today's time. Millets are one such solution, these are traditional grains used from the past of five thousand years. Nowadays millets are being popular as nutri cereals, nutri millets and as superfood. Millets are gluten free hence does not lead to celiac disease, unlike wheat. These are very excellent food for a diabetic person as it takes longer time to get digested and hence can provide energy for longer tenure.
    Keywords: millets; biofortification; Kshudra Danya; Ayurveda; gluten; chronic hunger; nutrition.
    DOI: 10.1504/IJBRA.2025.10065722
     
  • Optimizing Multi-User Massive MIMO Systems through Particle Filter Precoding: A Comprehensive Performance Analysis   Order a copy of this article
    by Terefe Abebe Beyene, Satyasis Mishra, Tadesse Hailu Ayane, Davinder Rathee, Bijaya Paikray 
    Abstract: Due to globalisation, the demands of network subscribers for different services and the total number of users in the communication industry is growing day to day. To address the demand of these users, the communication industry needed to be upgraded to support the growing demand. This research proposes an optimised particle filter, and nonlinear precoding technique to mitigate this issue. The computational complexity analysis of TH, DPC, and VP and proposed optimised particle filter precoding techniques. Signal-to-noise ratio versus bit error rate, signal-to-noise ratio versus spectral efficiency, the number of transmits antennas versus average sum spectral efficiency, and others were used to analyse the results. The simulation result shows that the proposed optimised particle filter precoding outperforms the existing nonlinear precoding those are, Tomlinson-Harashima (TH), dirty research coding (DPC), and vector perturbation (VP) precoding techniques in average sum spectral efficiency and bit error rate performance on different modulation techniques.
    Keywords: optimised particle filter precoding; linear precoding; nonlinear precoding; spectral efficiency; bit error rate; BER; massive MIMO.
    DOI: 10.1504/IJBRA.2025.10065870
     
  • Mobile Application based Pulmonary Disease Prediction using Respiratory Sound and Deep Learning   Order a copy of this article
    by Hiwot Habtamu, Mesfin Abebe, Sudhir Kumar Mohapatra 
    Abstract: Pulmonary diseases are contagious illnesses that disrupt the respiratory system, often affecting the lungs. Diagnosing these diseases can be challenging due to similarities with other lung conditions. While many studies use pulmonary sounds for prediction, this study integrates patient medical history and respiratory sounds to enhance prediction accuracy using deep learning. By combining these data sources, a pulmonary disease prediction model was developed and integrated into a mobile app using TensorFlow Lite, improving accessibility. The model, leveraging Melspectrogram characteristics, achieved 97.0% accuracy, significantly higher than the 73.15% accuracy with only Spec-Augmentation. Evaluation by 10 experts on 30 use cases showed 26 accurate classifications, demonstrating the model's effectiveness and the benefits of using combined data for pulmonary disease prediction. In general, this study demonstrated that building a model using patient symptoms and pulmonary sound and embedding it in a mobile application improves the prediction of pulmonary disease significantly.
    Keywords: Artificial Intelligence; Deep Learning; Respiratory Sound; Pulmonary Diseases; Mobile application.
    DOI: 10.1504/IJBRA.2025.10065933
     
  • LeNet-Xception: An Advanced Deep Learning Model for Early Covid-19 Detection from CT Scan Images   Order a copy of this article
    by Noor Fathima K, Renukalatha S 
    Abstract: The COVID-19 pandemic has necessitated the deep learning, a subset of artificial intelligence, has had noteworthy development in the field of COVID-19 identification. Deep learning algorithms can analyse medical images, like CT scan images to aid in the swift and precise diagnosis of COVID-19. Deep learning models, such as LeNet and Xception, have been used in recent studies to diagnose COVID-19 from images of CT with high accuracy. This paper presents a deep learning approach for the detection of COVID-19 using computed tomography (CT) images by proposing a hybrid model, called LeNet-Xception. Various performance metrics, including specificity, sensitivity, and accuracy, were used to estimate the performance of the presented method. LeNet-Xception model attained an accuracy of 95.9%, a sensitivity of 97.5%, and a specificity of 93.8%. According to the results, the suggested technique suggests that can precisely identify cases of COVID-19 by utilising images of CT scans with high accuracy.
    Keywords: Covid-19; CT images; Disease detection; LeNet; Deep learning.
    DOI: 10.1504/IJBRA.2025.10065939
     
  • Analysis of the Impact of Loss Functions in U-Net Architecture for Segmentation of Right Ventricle   Order a copy of this article
    by Mahesha Y.  
    Abstract: The present paper sheds light on the effect of loss functions in U-Net architecture for the segmentation of the right ventricle. Five loss functions namely binary cross-entropy, dice, inverse dice, dice combo and combined have been tested using optimisers such as Adam, stochastic gradient descent and root mean square propagation. The accuracy of the U-Net model is measured using the popular dice coefficient metric. The two loss functions dice and dice combo achieved maximum dice coefficients of 0.7825 and 0.7633 with stochastic gradient descent respectively. The result also shows that the loss functions such as dice and dice combo give acceptable dice coefficients with all three chosen optimisers. The loss functions binary cross entropy, combined and inverse dice have achieved moderate dice coefficients value with Adam and root mean square propagation optimisers but have shown very poor performance with stochastic gradient descent optimiser. The dice and dice combo loss functions with stochastic gradient descent optimiser are good candidates for segmentation of the right ventricle in U-Net architecture.
    Keywords: U-Net; binary cross entropy; dice; inverse dice; right ventricle.
    DOI: 10.1504/IJBRA.2025.10065947
     
  • Long Short-Term Memory based Model Predictive Control of Blood Glucose Level for Type 1 Diabetes Mellitus Treatment   Order a copy of this article
    by Nitesh Kumar Barnawal, Hoo Sang Ko, Sarah Park, H. Felix Lee, Guim Kwon 
    Abstract: This paper presents a novel method to control blood glucose levels (BGL) based on predictions made by a long short-term memory (LSTM) network. An initial LSTM model was trained with data from rats with type 1 diabetes mellitus (T1DM) using Open Artificial Pancreas System (OpenAPS). Transfer learning was applied to develop an individualised prediction model based on the initial model. The LSTM model predicted BGL with a root mean squared error (RMSE) of 11.8240 mg/dl. The model was integrated into model predictive control (LSTM-MPC), which optimised insulin injection based on BGL predictions. Evaluated against a neural network-based MPC (NN-MPC) and OpenAPS using different diets and rats, LSTM-MPC outperformed both in control performance. This study demonstrated a closed-loop BGL control system tested with in vivo diabetic rats. The prediction model is re-trainable quickly using small datasets obtained from individual rats, which provides a feasible solution for individualised T1DM treatment.
    Keywords: LSTM; blood glucose level prediction; type 1 diabetes mellitus (T1DM); model predictive control; transfer learning; time series forecasting; artificial pancreas system..
    DOI: 10.1504/IJBRA.2025.10065994
     
  • Fine-Tuning Predictive Models: A Comprehensive Analysis for Accurate Diabetes Risk Stratification   Order a copy of this article
    by Nuzhat Yatoo, I. Sathik Ali 
    Abstract: Diabetes is a major global health concern since it causes serious complications like kidney disease, heart problems, and eyesight loss. In pursuit of accurate disease diagnosis machine learning (ML) methods have been employed resulting in favourable outcomes. In this study, an innovative diabetes prediction model is introduced that incorporates a comparison of various ML techniques, including logistic regression, K-nearest neighbour, naive Bayes, decision tree, and CatBoost on a diabetes database in order to improve on existing systems for disease prediction, specifically concerned with Diabetes by establishing the best performing model based on performance metrics such as accuracy, recall, precision, F1 score, Mathews correlation coefficient (MCC), Cohen Kappa, index of agreement and area under the curve (AUC). To optimise their results the techniques are subjected to hyperparameter tuning. The metric values thus obtained from the proposed methodology establish CatBoost as the best performing model and, hence, the most viable for diabetes prediction.
    Keywords: diabetes; machine learning; feature selection; SMOTE Tomek; hyper parameter optimisation; prediction.
    DOI: 10.1504/IJBRA.2025.10066073
     
  • LARSE: Level-Based Associated Residual Network with Squeeze-and-Excitation for Breast Cancer Detection and Classification   Order a copy of this article
    by A.N.U. Rakhi P. S, Rajesh R. S 
    Abstract: Breast cancer is considered as a serious disease causing a high mortality rate amongst women. In recent years, computer aided diagnosis (CAD) techniques have the radiologists to make proper decisions on mammograms more accurately. The existing CAD method may not contribute significant results for the early identification of breast mass especially at stages 1 and 2. This work introduces a level-based associated residual network with squeeze-and-excitation (LARSE) block for breast cancer classification. Initially, the input image undergoes pre-processing using the contrast limited adaptive histogram equalisation (CLAHE) model. Then, the feature extraction process is done by utilising a dual ResNet-based feature extraction model, LARSE. The LARSE model is used for multilevel breast cancer classification based on BI.RADS categories, tested on CBIS.DDSM and INbreast mammogram datasets. The LARSE model achieved an accuracy of 96.9% (
    Keywords: mammography; CAD; breast cancer; classification; deep learning.
    DOI: 10.1504/IJBRA.2025.10066341
     
  • Enhancing Data Rate Efficiency in Multi-Cell Massive MIMO Systems Through Pilot Resource Allocation   Order a copy of this article
    by S. Mishra, Betelhem Gudina, Demissie Jobir, Davinder Rathee, Bijay Paikaray 
    Abstract: Pilot contamination (PC) limits the system's performance and highly reduces the data rates. To overcome this problem and improve the data rate of a multicell massive MIMO system, a modified soft pilot reuse (mSPR) is proposed. For clustered users, mSPR assigns the same pilot set to low PC severity centre zone users, reusing them in a grouped cell. Centre zone users are randomly assigned pilots from the same group, with the maximum user serving as the pilot reference for orthogonal allocation. The simulation result shows the data rate improvement of the multi-cell multi-user massive MIMO system with the proposed mSPR pilot resource allocation. The number of orthogonal pilots is reduced, improving the achievable uplink rate and spectral efficiency over pre-existing schemes. With different numbers of base station antennas and transmission power, the proposed mSPR pilot resource allocation scheme provides average data rates of 3.5 bps/Hz and 2.78 bps/Hz, respectively.
    Keywords: pilot contamination; massive MIMO; modified soft pilot reuse; mSPR; time-division duplex.
    DOI: 10.1504/IJBRA.2025.10066367
     
  • ResNet-Based Deep Learning Approach for Automated ECG Arrhythmia Recognition System   Order a copy of this article
    by Soumen Ghosh, Satish Chander 
    Abstract: This study presents approach to signal classification, focusing on electrocardiogram signals using deep learning techniques Leveraging TensorFlow and ResNet50 architecture, research aims to develop robust model for accurate classification ECG signals, crucial various medical diagnostics ,healthcare applications Methodology involves pre-processing ECG dataset, constructing deep neural network model based on ResNet50, and training model on labeled dataset Subsequently, trained model undergoes comprehensive evaluation using performance metrics such as accuracy, confusion matrix analysis, classification report, F1-score, and ROC curve analysis The results demonstrate the effectiveness of proposed approach in accurately classifying ECG signals, showcasing its potential for enhancing medical diagnostics and improving patient care In this study we achieved 92 71% accuracy score by using proposed approach This research contributes to advancing field of signal classification in healthcare, offering a promising methodology for automated analysis and interpretation of ECG signals, ultimately aiding healthcare professionals in timely diagnosis and treatment of cardiovascular conditions.
    Keywords: Deep learning; Signal classification; Electrocardiogram (ECG); ResNet50; TensorFlow; Medical diagnostics; Healthcare; Accuracy; Performance evaluation; Confusion matrix; Classification report.
    DOI: 10.1504/IJBRA.2025.10066430
     
  • Deep Feature Fusion and Ensemble Learning to Create an Effective CNN Brain Tumour Classification Model   Order a copy of this article
    by Sathees Kumar  
    Abstract: Early brain tumour exploration can streamline treatment. Some automated diagnosis system aids radiologists in distinguishing between normal and abnormal brain tissues, simplifying clinical and diagnostic processes. However, categorizing MRI images is challenging due to low contrast, noise, tumour shape and localisation dissimilarity, and similarity between ordinary and cancerous regions of interest (ROIs). This study uses a deep convolutional neural network with feature blending and ensemble learning to analyse MRI abnormalities, followed by detection and classification tasks. The ensemble learning method effectively distinguishes between ordinary and cancerous tumour ROIs, yielding reliable results. Feature fusion identifies discriminative features between classes. To address overfitting in smaller data sets, depth-wise separable convolution and spatial drop-out techniques are explored for MRI brain image classification. The proposed approach has been validated on two freely available datasets, Kaggle and BrATS, with the BrATS dataset showing superior outcomes in accuracy, specificity, and sensitivity (0.995, 0.996, 0.996).
    Keywords: Brain tumour; Feature Fusion; (CAD) Computer-Aided Diagnosis; Ensemble Learning; Brain tumour classification; Regions of Interest (ROIs); Psychological Health; Malignant Primary Brain Tumors,.
    DOI: 10.1504/IJBRA.2025.10066432
     
  • Unmasking Poly Cystic Ovarian Syndrome(PCOS): Harnessing Deep Learning in Ultrasound Imaging Analysis   Order a copy of this article
    by Nusrath Fathima, Pradeep Kumar 
    Abstract: A large proportion of women globally suffer from PCOS, a hormonal condition that impacts reproductive health and poses major dangers to their metabolic and cardiovascular health. PCOS diagnosis at an early stage is crucial to mitigate these risks and provide timely interventions. The challenge in diagnosing the PCOS is to count the follicles and calculate their volume in the ovaries, which is currently done manually by doctors and radiologists utilising ovary ultrasonography. In this study, a shallow robust deep learning model is proposed with three alternate convolution and max pooling layers followed by flatten, dropout and dense layer that automatically detects PCOS from ultrasound images with low computational complexity. The performance of the proposed model is compared with the Inception V3 and Dense Net 201 deep learning models. The benchmark PCOS dataset from Kaggle was used for the study and dataset was split as 70:30 for training and testing. In conclusion, our study highlights the potential of deep learning in the field of gynaecology and reproductive medicine. It can revolutionise PCOS diagnosis and contribute to better health outcomes for women with PCOS.
    Keywords: PCOS; Deep Learning; CNN ; Ultrasound Images; Medical Imaging; Early Diagnosis; Automated Detection.
    DOI: 10.1504/IJBRA.2025.10066434
     
  • An Optimised InceptionResNetV2 Model for Breast Cancer Histopathology Image Classification   Order a copy of this article
    by Keren Evangeline I, Glory Precious J, Anand C. D, Angeline Kirubha S. P. 
    Abstract: Breast cancer usually develops in women due to uncontrolled cell division. The clinical gold standard for diagnosing this disease is breast histopathology. Automating breast cancer detection saves time and aids pathologists. Deep learning is vital here. This study investigates utilising convolutional neural networks and transfer learning to identify breast cancer from histopathological image patches of all magnifications. Thus, an optimised deep learning model for breast cancer image classification was created by adding and modifying InceptionResNetV2 layers. Transfer learning was used to train and fine-tune it. The model was then compared to VGG-16, DenseNet-121, and original InceptionResNetV2 networks. The optimised InceptionResNetV2 model outperforms all other models with images of all magnification factors. For 400X magnification image classification, the optimised InceptionResNetV2 model has the maximum accuracy of 98%. Hence, the model predicts benign and malignant cancer image patches more accurately.
    Keywords: image patches; optimised InceptionResNetV2; deep learning; diagnosis; histopathology; transfer learning; breast cancer.
    DOI: 10.1504/IJBRA.2025.10066542
     
  • An improved Machine Learning Based System for Depression Detection with RFLR Model   Order a copy of this article
    by S.Nalini Poornima, S. Geetha 
    Abstract: The world is changing at a dizzying pace due to technological advancements and improved human abilities. Physical and emotional well-being suffer due to the immense strain of keeping up with the fast-paced society around us. Depression is a prevalent mental condition that affects everyone at some time. Globally, millions of individuals suffer from depression, making it one of the most prevalent mental illnesses. Prolonged and excessive fretting about several issues that a healthy person would often dismiss as unimportant characterises depression. Machine learning algorithms are crucial for deciphering healthcare data and revealing hidden information. In the investigated approach, a hybrid model was utilised to combine RF and LR using a Voting Classifier to construct a depression prediction model. After acquiring a suitable dataset from Kaggle, the suggested method for depression prediction moves on to pre-processing, where data is cleaned and scaled to guarantee consistency and quality. The proposed model is trained and tested with the b_depressed.csv dataset obtained from a Kaggle source with 1,767 records. The model demonstrates superior performance in both accuracy and overall effectiveness compared to other models, as indicated by the findings.
    Keywords: Depression Prediction; Classification; Preprocessing; Random Forest (RF); Logistic Regression (LR); Machine Learning Based System; Depression detection; RFLR model.
    DOI: 10.1504/IJBRA.2025.10066894