Cross-platform microarray data integration using the Normalised Linear Transform
by Huilin Xiong, Ya Zhang, Xue-Wen Chen, Jiangsheng Yu
International Journal of Data Mining and Bioinformatics (IJDMB), Vol. 4, No. 2, 2010

Abstract: Small sample size is one of the biggest challenges in microarray data analysis. With microarray data being dramatically accumulated, integrating data from related studies represents a natural way to increase sample size so that more reliable statistical analysis may be performed. In this paper, we present a simple and effective integration scheme, called Normalised Linear Transform (NLT), to combine data from different microarray platforms. The NLT scheme is compared with three other integration schemes for two tasks: classification analysis and gene marker selection. Our experiments demonstrate that the NLT scheme performs best in terms of classification accuracy, and leads to more biologically significant marker genes.

Online publication date: Thu, 11-Mar-2010

The full text of this article is only available to individual subscribers or to users at subscribing institutions.

 
Existing subscribers:
Go to Inderscience Online Journals to access the Full Text of this article.

Pay per view:
If you are not a subscriber and you just want to read the full contents of this article, buy online access here.

Complimentary Subscribers, Editors or Members of the Editorial Board of the International Journal of Data Mining and Bioinformatics (IJDMB):
Login with your Inderscience username and password:

Username:        Password:          Forgotten your password?

Want to subscribe?
A subscription gives you complete access to all articles in the current issue, as well as to all articles in the previous three years (where applicable). See our Orders page to subscribe.

If you still need assistance, please email subs@inderscience.com