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International Journal of Computational Biology and Drug Design

2014 Vol. 7 No. 2/3

Special Issue on Computational Methods for Omics Data

Guest Editors: Professor Zhongming Zhao, Professor Bing Zhang, Professor Yufei Huang, Professor Hua Xu and Professor Jason E. McDermott


PagesTitle and authors
102-112A comparison of microRNA sequencing reproducibility and noise reduction using mirVana and TRIzol isolation methods
Yan Guo; Amma Bosompem; Xue Zhong; Travis Clark; Yu Shyr; Annette S. Kim
DOI: 10.1504/IJCBDD.2014.061642

113-129Classification of T cell movement tracks allows for prediction of cell function
Reka K. Kelemen; Gengen F. He; Hannah L. Woo; Thomas Lane; Caroline Rempe; Jun Wang; Ian A. Cockburn; Rogerio Amino; Vitaly V. Ganusov; Michael W. Berry
DOI: 10.1504/IJCBDD.2014.061655

130-145BOTUX: Bayesian-like operational taxonomic unit examiner
Vishal N. Koparde; Ricky S. Adkins; Jennifer M. Fettweis; Myrna G. Serrano; Gregory A. Buck; Mark A. Reimers; Nihar U. Sheth
DOI: 10.1504/IJCBDD.2014.061652

146-156The centrality of cancer proteins in human protein-protein interaction network: a revisit
Wei Xiong; Luyu Xie; Shuigeng Zhou; Hui Liu; Jihong Guan
DOI: 10.1504/IJCBDD.2014.061643

157-167Localisation of Drosophila embryos using active contours in channel spaces
Qi Li; Soujanya Siddavaram Ananta
DOI: 10.1504/IJCBDD.2014.061644

168-182Aeromonas phages encode tRNAs for their overused codons
Ramanandan Prabhakaran; Shivapriya Chithambaram; Xuhua Xia
DOI: 10.1504/IJCBDD.2014.061645

183-194Differential Shannon entropy and differential coefficient of variation: alternatives and augmentations to differential expression in the search for disease-related genes
Kai Wang; Charles A. Phillips; Gary L. Rogers; Fredrik Barrenas; Mikael Benson; Michael A. Langston
DOI: 10.1504/IJCBDD.2014.061656

195-213Correcting imbalanced reads coverage in bacterial transcriptome sequencing with extreme deep coverage
Xinjun Zhang; Dharanesh Gangaiah; Robert S. Munson Jr.; Stanley M. Spinola; Yunlong Liu
DOI: 10.1504/IJCBDD.2014.061646

214-224Supervised method for periodontitis phenotypes prediction based on microbial composition using 16S rRNA sequences
Wei Chen; Yong-Mei Cheng; Shao-Wu Zhang; Quan Pan
DOI: 10.1504/IJCBDD.2014.061647

225-258Generic strategies for chemical space exploration
Jakob L. Andersen; Christoph Flamm; Daniel Merkle; Peter F. Stadler
DOI: 10.1504/IJCBDD.2014.061649

Additional Papers

259-277Automatic cell segmentation in strongly agglomerated cell networks for different cell types
S. Buhl; B. Neumann; S.C. Schäfer; A.L. Severing
DOI: 10.1504/IJCBDD.2014.061641

278-294P56lck kinase inhibitor studies: a 3D QSAR approach towards designing new drugs from flavonoid derivatives
Shravan Kumar Gunda; Sandeep Kumar Mulukala Narasimha; Mahmood Shaik
DOI: 10.1504/IJCBDD.2014.061648